==============================================
Installing Bio++ libraries and programme suite
==============================================

1) Install cmake
   
    ::

    $ sudo yum install cmake

2) From the `sources repository <http://biopp.univ-montp2.fr/Repositories/sources/>`_, get
   
    ::

    $ wget http://biopp.univ-montp2.fr/Repositories/sources/bpp-core-2.0.1.tar.gz
    $ tar zxvf bpp-core-2.0.1.tar.gz && cd bpp-core-2.0.1
    $ cmake -DCMAKE_INSTALL_PREFIX=/share/apps


    - The CXX compiler identification is GNU
    - Check for working CXX compiler: /usr/bin/c++
    - Check for working CXX compiler: /usr/bin/c++ -- works
    - Detecting CXX compiler ABI info
    - Detecting CXX compiler ABI info - done
    - Could NOT find Doxygen  (missing:  DOXYGEN_EXECUTABLE)
    - CTest cannot determine repository type. Please set UPDATE_TYPE to 'cvs' or 'svn'. CTest update will not work.
    - Configuring done
    - Generating done
    - Build files have been written to: /usr/local/src/bio++/bpp-core-2.0.1
    
    ::
    
    $ make install


3) Repeat for (in this order)

    - bpp-utils-1.5.0.tar.gz
    - bpp-numcalc-1.8.0.tar.gz
    - bpp-seq-2.0.1.tar.gz
    - bpp-phyl-2.0.1.tar.gz
    - bpp-popgen-2.0.1.tar.gz
    - bpp-raa-2.0.1.tar.gz
    - bppsuite-0.6.1.tar.gz