Notes on AMOS Installation:ΒΆ

Install MUMmer: Make and copy to /share/apps - add to $PATH

MUmmer provides: nucmer, delta-filter, and show-coords required by AMOS

Install C++ BOOST libraries from CentOS5updates:

$ sudo yum install boost-devel

Install QT4:

$ sudo yum install qt4-devel

Configure AMOS:

$ ./configure --prefix=/share/apps/amos --with-qmake-qt4=/usr/lib64/qt4/bin/qmake

blah, blah, blah...

:: – AMOS Assembler 3.1.0 Configuration Results – C compiler: gcc -g -O2 C++ compiler: g++ -g -O2 GCC version: gcc (GCC) 4.1.2 20080704 (Red Hat 4.1.2-46) Host System type: x86_64-unknown-linux-gnu Install prefix: /share/apps/amos Install eprefix: ${prefix}

See config.h for further configuration information. Email <amos-help@lists.sourceforge.net> with questions and bug reports.

Build AMOS:

$ make && make check && make install

Add to $PATH:

PATH=$PATH:/share/apps/amos/bin